A Computational Model for Simulating Continuous Time Boolean Networks

نویسندگان

  • Hakan Öktem
  • Ronald Pearson
  • Olli Yli-Harja
  • Daniel Nicorici
  • Karen Egiazarian
  • Jaakko Astola
چکیده

Random Boolean networks are among the most popular model systems used for modelling the gene regulatory networks due to their answering of the many biological questions in a realistic way, insights into the overall behavior of large genetic networks and suitability for inference. However, discrete time Boolean networks have serious limitations in simulating non-repeating complex dynamic systems and incorporating the biochemical information on the reaction rates. In this work we introduce continuous-time Boolean network structure to simulate the genomic regulation as a binary complex dynamic system, discuss their potential of solving the problems of the conventional discrete time Boolean networks and develop a framework for simulating continuous time Boolean networks.

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تاریخ انتشار 2002